Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shank1D3YZU1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Shank1D3YZU1 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Gm23153-201ENSMUST00000175323 313 ntBASIC11.01□□□□□ -0.65
Shank1D3YZU1 Mir7076-201ENSMUST00000183519 74 ntBASIC11.01□□□□□ -0.65
Shank1D3YZU1 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.01□□□□□ -0.65
Shank1D3YZU1 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.01□□□□□ -0.65
Shank1D3YZU1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Gm45120-201ENSMUST00000208880 408 ntBASIC11.01□□□□□ -0.65
Shank1D3YZU1 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Shank1D3YZU1 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.01□□□□□ -0.65
Shank1D3YZU1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Gm28386-201ENSMUST00000189147 1849 ntBASIC11□□□□□ -0.65
Shank1D3YZU1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Gm22133-201ENSMUST00000102082 109 ntBASIC11□□□□□ -0.65
Shank1D3YZU1 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11□□□□□ -0.65
Shank1D3YZU1 Gm15725-201ENSMUST00000119947 1090 ntBASIC11□□□□□ -0.65
Shank1D3YZU1 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11□□□□□ -0.65
Shank1D3YZU1 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11□□□□□ -0.65
Shank1D3YZU1 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11□□□□□ -0.65
Shank1D3YZU1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11□□□□□ -0.65
Shank1D3YZU1 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Shank1D3YZU1 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11□□□□□ -0.65
Shank1D3YZU1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11□□□□□ -0.65
Shank1D3YZU1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Shank1D3YZU1 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Shank1D3YZU1 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11□□□□□ -0.65
Shank1D3YZU1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Shank1D3YZU1 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms