Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a6B1AVK5 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Gm5805-201ENSMUST00000072779 456 ntBASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Gm12948-201ENSMUST00000119406 682 ntBASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Gm14395-201ENSMUST00000120494 563 ntBASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Gm10169-201ENSMUST00000121822 348 ntBASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Gm8197-202ENSMUST00000193422 934 ntBASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Gm5982-201ENSMUST00000196234 512 ntBASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Mt1-202ENSMUST00000211807 1085 ntBASIC12.38□□□□□ -0.43
Col4a6B1AVK5 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.38□□□□□ -0.43
Col4a6B1AVK5 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.38□□□□□ -0.43
Col4a6B1AVK5 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.38□□□□□ -0.43
Col4a6B1AVK5 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Col4a6B1AVK5 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Gm12218-201ENSMUST00000117666 399 ntBASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Gm13549-201ENSMUST00000118339 796 ntBASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Mir6923-201ENSMUST00000184592 72 ntBASIC12.37□□□□□ -0.43
Col4a6B1AVK5 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Col4a6B1AVK5 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.37□□□□□ -0.43
Col4a6B1AVK5 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms