Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.81□□□□□ -0.36
Scn1aA2APX8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scn1aA2APX8 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.8□□□□□ -0.36
Scn1aA2APX8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.8□□□□□ -0.36
Scn1aA2APX8 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.8□□□□□ -0.36
Scn1aA2APX8 Gm25881-201ENSMUST00000157783 103 ntBASIC12.8□□□□□ -0.36
Scn1aA2APX8 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scn1aA2APX8 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Gm8343-201ENSMUST00000182705 994 ntBASIC12.79□□□□□ -0.36
Scn1aA2APX8 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.79□□□□□ -0.36
Scn1aA2APX8 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.79□□□□□ -0.36
Scn1aA2APX8 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.79□□□□□ -0.36
Scn1aA2APX8 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.79□□□□□ -0.36
Scn1aA2APX8 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn1aA2APX8 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.78□□□□□ -0.36
Scn1aA2APX8 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Gm8956-201ENSMUST00000203939 825 ntBASIC12.78□□□□□ -0.36
Scn1aA2APX8 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.78□□□□□ -0.36
Scn1aA2APX8 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.78□□□□□ -0.36
Scn1aA2APX8 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.78□□□□□ -0.36
Scn1aA2APX8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms