Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
H2afb2S4R1M3 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Gm13786-201ENSMUST00000122371 333 ntBASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Gm17420-201ENSMUST00000164753 153 ntBASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Gm28882-201ENSMUST00000185504 314 ntBASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Gm43118-201ENSMUST00000199149 775 ntBASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Gm18054-201ENSMUST00000207539 555 ntBASIC12.29□□□□□ -0.44
H2afb2S4R1M3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
H2afb2S4R1M3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Gm24934-201ENSMUST00000103764 111 ntBASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Gm4986-201ENSMUST00000119731 549 ntBASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Gm10608-202ENSMUST00000213924 676 ntBASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Gm7046-201ENSMUST00000221351 977 ntBASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Morn2-202ENSMUST00000227729 656 ntBASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb2S4R1M3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms