Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cldn9Q9Z0S7 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Gm24830-201ENSMUST00000102024 166 ntBASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Gm13875-201ENSMUST00000120162 282 ntBASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Mospd4-201ENSMUST00000180618 576 ntBASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Gm26232-201ENSMUST00000083360 166 ntBASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Pck2-205ENSMUST00000226352 2784 ntBASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn9Q9Z0S7 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Gm2546-201ENSMUST00000182630 991 ntBASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Gm37424-201ENSMUST00000191727 561 ntBASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Gm38002-201ENSMUST00000193255 180 ntBASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Gm42937-201ENSMUST00000197360 752 ntBASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Gm19309-201ENSMUST00000218295 205 ntBASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn9Q9Z0S7 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms