Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Gm11667-201ENSMUST00000119828 486 ntBASIC12.06□□□□□ -0.48
Rrp8Q9DB85 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Gm44551-201ENSMUST00000208804 171 ntBASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rrp8Q9DB85 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Gm23119-201ENSMUST00000158610 140 ntBASIC12.05□□□□□ -0.48
Rrp8Q9DB85 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Gm3332-201ENSMUST00000189337 928 ntBASIC12.05□□□□□ -0.48
Rrp8Q9DB85 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Gm45219-201ENSMUST00000205602 465 ntBASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Gm4157-201ENSMUST00000211647 679 ntBASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Ginm1-202ENSMUST00000065124 300 ntBASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.05□□□□□ -0.48
Rrp8Q9DB85 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rrp8Q9DB85 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp8Q9DB85 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.04□□□□□ -0.48
Rrp8Q9DB85 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp8Q9DB85 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.04□□□□□ -0.48
Rrp8Q9DB85 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp8Q9DB85 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rrp8Q9DB85 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp8Q9DB85 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp8Q9DB85 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp8Q9DB85 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp8Q9DB85 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp8Q9DB85 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp8Q9DB85 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrp8Q9DB85 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rrp8Q9DB85 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rrp8Q9DB85 Gm11628-201ENSMUST00000117568 171 ntBASIC12.04□□□□□ -0.48
Rrp8Q9DB85 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms