Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Gm15806-201ENSMUST00000120696 955 ntBASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Gm23119-201ENSMUST00000158610 140 ntBASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Gm4271-201ENSMUST00000174444 973 ntBASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Gm6244-201ENSMUST00000178732 841 ntBASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Gm29705-201ENSMUST00000212598 474 ntBASIC12.66□□□□□ -0.38
Snf8Q9CZ28 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Snf8Q9CZ28 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Mir1894-201ENSMUST00000122802 81 ntBASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Gm22331-201ENSMUST00000158066 136 ntBASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Gm27892-201ENSMUST00000185017 106 ntBASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Gm17794-201ENSMUST00000220252 955 ntBASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Gm5356-201ENSMUST00000093326 615 ntBASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Snf8Q9CZ28 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Snf8Q9CZ28 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Snf8Q9CZ28 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Snf8Q9CZ28 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms