Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Gm12241-201ENSMUST00000118330 726 ntBASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Gm13492-201ENSMUST00000119772 665 ntBASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Olfr284-202ENSMUST00000206647 966 ntBASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Gm24136-201ENSMUST00000083374 165 ntBASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf135Q9CWS1 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Cog3-203ENSMUST00000227473 4197 ntBASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Gm13315-201ENSMUST00000120376 991 ntBASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Gm38341-201ENSMUST00000195357 515 ntBASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Cts7-204ENSMUST00000225321 1257 ntBASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf135Q9CWS1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.8□□□□□ -0.36
Rnf135Q9CWS1 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf135Q9CWS1 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf135Q9CWS1 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf135Q9CWS1 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf135Q9CWS1 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf135Q9CWS1 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rnf135Q9CWS1 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf135Q9CWS1 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf135Q9CWS1 Rubie-203ENSMUST00000227803 2430 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms