Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm42550-201ENSMUST00000201553 960 ntBASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Gm5312-201ENSMUST00000203728 547 ntBASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 AC165157.4-201ENSMUST00000220587 139 ntBASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.99□□□□□ -0.81
RTRAFQ9CQE8 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Gm45191-201ENSMUST00000205846 5439 ntBASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Gm18227-201ENSMUST00000211082 1468 ntBASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
RTRAFQ9CQE8 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Gm7336-201ENSMUST00000107041 1232 ntBASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Gm4204-201ENSMUST00000110798 1231 ntBASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Gm11978-201ENSMUST00000122315 466 ntBASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Gm27680-201ENSMUST00000184192 160 ntBASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 AC133598.3-202ENSMUST00000224219 531 ntBASIC9.97□□□□□ -0.81
RTRAFQ9CQE8 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms