Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12□□□□□ -0.49
Msh4Q99MT2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12□□□□□ -0.49
Msh4Q99MT2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Msh4Q99MT2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Daam2-202ENSMUST00000224595 1926 ntBASIC12□□□□□ -0.49
Msh4Q99MT2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Msh4Q99MT2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12□□□□□ -0.49
Msh4Q99MT2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12□□□□□ -0.49
Msh4Q99MT2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12□□□□□ -0.49
Msh4Q99MT2 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12□□□□□ -0.49
Msh4Q99MT2 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12□□□□□ -0.49
Msh4Q99MT2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Msh4Q99MT2 Gm43758-201ENSMUST00000199500 367 ntBASIC12□□□□□ -0.49
Msh4Q99MT2 Gm45865-201ENSMUST00000211815 945 ntBASIC12□□□□□ -0.49
Msh4Q99MT2 AC154171.1-201ENSMUST00000224610 643 ntBASIC12□□□□□ -0.49
Msh4Q99MT2 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12□□□□□ -0.49
Msh4Q99MT2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12□□□□□ -0.49
Msh4Q99MT2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12□□□□□ -0.49
Msh4Q99MT2 Gm26035-201ENSMUST00000083065 308 ntBASIC12□□□□□ -0.49
Msh4Q99MT2 Gm22058-201ENSMUST00000083393 310 ntBASIC12□□□□□ -0.49
Msh4Q99MT2 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12□□□□□ -0.49
Msh4Q99MT2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Msh4Q99MT2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12□□□□□ -0.49
Msh4Q99MT2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12□□□□□ -0.49
Msh4Q99MT2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Msh4Q99MT2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.99□□□□□ -0.49
Msh4Q99MT2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.99□□□□□ -0.49
Msh4Q99MT2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.99□□□□□ -0.49
Msh4Q99MT2 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.99□□□□□ -0.49
Msh4Q99MT2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.99□□□□□ -0.49
Msh4Q99MT2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Gm38341-201ENSMUST00000195357 515 ntBASIC11.99□□□□□ -0.49
Msh4Q99MT2 Gm7783-201ENSMUST00000204795 781 ntBASIC11.99□□□□□ -0.49
Msh4Q99MT2 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.99□□□□□ -0.49
Msh4Q99MT2 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.99□□□□□ -0.49
Msh4Q99MT2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Msh4Q99MT2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.98□□□□□ -0.49
Msh4Q99MT2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msh4Q99MT2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msh4Q99MT2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Msh4Q99MT2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Msh4Q99MT2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms