Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Gm23119-201ENSMUST00000158610 140 ntBASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Gm6222-202ENSMUST00000182143 629 ntBASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Gm42599-201ENSMUST00000201308 469 ntBASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Snora73a-201ENSMUST00000082453 205 ntBASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cstf3Q99LI7 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Gm13736-201ENSMUST00000119272 253 ntBASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cstf3Q99LI7 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cstf3Q99LI7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Cstf3Q99LI7 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Cstf3Q99LI7 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.89□□□□□ -0.51
Cstf3Q99LI7 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.89□□□□□ -0.51
Cstf3Q99LI7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.89□□□□□ -0.51
Cstf3Q99LI7 Gm24548-201ENSMUST00000158650 108 ntBASIC11.89□□□□□ -0.51
Cstf3Q99LI7 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms