Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC15.14■□□□□ 0.01
RtcbQ99LF4 Gm13668-201ENSMUST00000119237 1001 ntBASIC15.14■□□□□ 0.01
RtcbQ99LF4 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RtcbQ99LF4 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Ighv5-11-201ENSMUST00000193354 371 ntBASIC15.14■□□□□ 0.01
RtcbQ99LF4 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
RtcbQ99LF4 CT485606.1-201ENSMUST00000213187 878 ntBASIC15.14■□□□□ 0.01
RtcbQ99LF4 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RtcbQ99LF4 AC122350.1-201ENSMUST00000228135 533 ntBASIC15.14■□□□□ 0.01
RtcbQ99LF4 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.14■□□□□ 0.01
RtcbQ99LF4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RtcbQ99LF4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.13■□□□□ 0.01
RtcbQ99LF4 Gm11836-201ENSMUST00000121022 441 ntBASIC15.13■□□□□ 0.01
RtcbQ99LF4 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.13■□□□□ 0.01
RtcbQ99LF4 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC15.13■□□□□ 0.01
RtcbQ99LF4 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RtcbQ99LF4 CT025553.1-201ENSMUST00000226292 299 ntBASIC15.13■□□□□ 0.01
RtcbQ99LF4 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Gm26035-201ENSMUST00000083065 308 ntBASIC15.13■□□□□ 0.01
RtcbQ99LF4 Gm5537-201ENSMUST00000091117 1252 ntBASIC15.13■□□□□ 0.01
RtcbQ99LF4 n-R5s211-201ENSMUST00000093689 119 ntBASIC15.13■□□□□ 0.01
RtcbQ99LF4 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Matn2-206ENSMUST00000228570 2798 ntBASIC15.13■□□□□ 0.01
RtcbQ99LF4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RtcbQ99LF4 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Gm6903-201ENSMUST00000160509 1366 ntBASIC15.12■□□□□ 0.01
RtcbQ99LF4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.12■□□□□ 0.01
RtcbQ99LF4 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Gm26013-201ENSMUST00000104404 119 ntBASIC15.12■□□□□ 0.01
RtcbQ99LF4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Gm5714-201ENSMUST00000197343 566 ntBASIC15.12■□□□□ 0.01
RtcbQ99LF4 Gm17889-201ENSMUST00000198410 598 ntBASIC15.12■□□□□ 0.01
RtcbQ99LF4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RtcbQ99LF4 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC15.12■□□□□ 0.01
RtcbQ99LF4 AC166344.1-201ENSMUST00000223745 674 ntBASIC15.12■□□□□ 0.01
RtcbQ99LF4 Gm5879-201ENSMUST00000089501 1209 ntBASIC15.12■□□□□ 0.01
RtcbQ99LF4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RtcbQ99LF4 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RtcbQ99LF4 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms