Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp11Q99K46 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Usp11Q99K46 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp11Q99K46 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp11Q99K46 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp11Q99K46 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp11Q99K46 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.98□□□□□ -0.33
Usp11Q99K46 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.98□□□□□ -0.33
Usp11Q99K46 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.98□□□□□ -0.33
Usp11Q99K46 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.98□□□□□ -0.33
Usp11Q99K46 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.98□□□□□ -0.33
Usp11Q99K46 Gm38002-201ENSMUST00000193255 180 ntBASIC12.98□□□□□ -0.33
Usp11Q99K46 Gm45880-201ENSMUST00000213041 853 ntBASIC12.98□□□□□ -0.33
Usp11Q99K46 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.98□□□□□ -0.33
Usp11Q99K46 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.98□□□□□ -0.33
Usp11Q99K46 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.98□□□□□ -0.33
Usp11Q99K46 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.98□□□□□ -0.33
Usp11Q99K46 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Usp11Q99K46 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Usp11Q99K46 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Usp11Q99K46 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp11Q99K46 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usp11Q99K46 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp11Q99K46 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Usp11Q99K46 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Usp11Q99K46 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.97□□□□□ -0.33
Usp11Q99K46 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.97□□□□□ -0.33
Usp11Q99K46 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp11Q99K46 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.97□□□□□ -0.33
Usp11Q99K46 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.97□□□□□ -0.33
Usp11Q99K46 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.97□□□□□ -0.33
Usp11Q99K46 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.97□□□□□ -0.33
Usp11Q99K46 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.97□□□□□ -0.33
Usp11Q99K46 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Usp11Q99K46 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp11Q99K46 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Usp11Q99K46 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Gm27572-201ENSMUST00000183702 255 ntBASIC12.97□□□□□ -0.33
Usp11Q99K46 Gm18054-201ENSMUST00000207539 555 ntBASIC12.97□□□□□ -0.33
Usp11Q99K46 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Usp11Q99K46 Gm9899-201ENSMUST00000065519 555 ntBASIC12.97□□□□□ -0.33
Usp11Q99K46 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Usp11Q99K46 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.97□□□□□ -0.33
Usp11Q99K46 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.97□□□□□ -0.33
Usp11Q99K46 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.97□□□□□ -0.33
Usp11Q99K46 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Usp11Q99K46 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp11Q99K46 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp11Q99K46 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.97□□□□□ -0.33
Usp11Q99K46 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms