Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
Pcdha3Q91Y16 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdha3Q91Y16 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Gm14726-201ENSMUST00000120623 896 ntBASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Gm9022-201ENSMUST00000182482 992 ntBASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Mir6420-201ENSMUST00000185032 102 ntBASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdha3Q91Y16 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Gm13875-201ENSMUST00000120162 282 ntBASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Gm13350-201ENSMUST00000120519 479 ntBASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Gm11597-201ENSMUST00000121423 964 ntBASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Gm20482-202ENSMUST00000174729 825 ntBASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Gm27320-201ENSMUST00000184892 109 ntBASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Gm31256-201ENSMUST00000194705 506 ntBASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Gm24136-201ENSMUST00000083374 165 ntBASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdha3Q91Y16 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdha3Q91Y16 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms