Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb20Q91XZ9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb20Q91XZ9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb20Q91XZ9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb20Q91XZ9 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb20Q91XZ9 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.52□□□□□ -0.4
Pcdhb20Q91XZ9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pcdhb20Q91XZ9 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb20Q91XZ9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb20Q91XZ9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb20Q91XZ9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Gm5187-201ENSMUST00000117317 991 ntBASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Gm13461-201ENSMUST00000120980 662 ntBASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Gm22552-201ENSMUST00000157796 337 ntBASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Gm43674-201ENSMUST00000196313 791 ntBASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Gm45437-202ENSMUST00000211418 694 ntTSL 3 BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 AC154419.1-201ENSMUST00000227627 272 ntBASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Tefm-201ENSMUST00000050207 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb20Q91XZ9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Mir686-201ENSMUST00000102174 109 ntBASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Mup-ps14-201ENSMUST00000118437 532 ntBASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Gm6806-201ENSMUST00000120092 1006 ntBASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Mir1938-201ENSMUST00000158746 100 ntBASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Prr13-202ENSMUST00000164688 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Gm21542-201ENSMUST00000182307 993 ntBASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Snora73a-201ENSMUST00000082453 205 ntBASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb20Q91XZ9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms