Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga4Q91XY4 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhga4Q91XY4 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Gm2991-201ENSMUST00000173338 480 ntBASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Gm27023-201ENSMUST00000182372 285 ntBASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Mir6420-201ENSMUST00000185032 102 ntBASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Gm38341-201ENSMUST00000195357 515 ntBASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Gm22058-201ENSMUST00000083393 310 ntBASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhga4Q91XY4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Daam2-202ENSMUST00000224595 1926 ntBASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Gm12058-201ENSMUST00000118614 437 ntBASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Gm27320-201ENSMUST00000184892 109 ntBASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Gm44405-201ENSMUST00000198952 126 ntBASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Cts7-204ENSMUST00000225321 1257 ntBASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhga4Q91XY4 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhga4Q91XY4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms