Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.41□□□□□ -0.26
Pcdhb17Q91VD8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb17Q91VD8 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb17Q91VD8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb17Q91VD8 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb17Q91VD8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb17Q91VD8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb17Q91VD8 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.41□□□□□ -0.26
Pcdhb17Q91VD8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb17Q91VD8 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb17Q91VD8 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Gm14704-201ENSMUST00000120300 874 ntBASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Gm17208-201ENSMUST00000168388 535 ntBASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Gm27001-201ENSMUST00000182252 936 ntBASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Gm27514-201ENSMUST00000183692 110 ntBASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Gm29663-201ENSMUST00000186962 853 ntBASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Gm7587-201ENSMUST00000207618 1021 ntBASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Gm32025-201ENSMUST00000217960 307 ntBASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb17Q91VD8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdhb17Q91VD8 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Trbv2-201ENSMUST00000103263 560 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Gm11850-201ENSMUST00000119679 479 ntBASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Gm8099-201ENSMUST00000200510 742 ntBASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 AC108945.1-201ENSMUST00000226477 94 ntBASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Snora73a-201ENSMUST00000082453 205 ntBASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb17Q91VD8 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms