Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps39Q8R5L3 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Gm23119-201ENSMUST00000158610 140 ntBASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Gm27731-201ENSMUST00000185192 107 ntBASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Gm4034-201ENSMUST00000187674 480 ntBASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Gm44958-201ENSMUST00000203734 736 ntBASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Gm6266-201ENSMUST00000203844 806 ntBASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Snora73a-201ENSMUST00000082453 205 ntBASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps39Q8R5L3 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Gm13736-201ENSMUST00000119272 253 ntBASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Gm9083-201ENSMUST00000120423 819 ntBASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Gm24548-201ENSMUST00000158650 108 ntBASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Gm27023-201ENSMUST00000182372 285 ntBASIC12.31□□□□□ -0.44
Vps39Q8R5L3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.31□□□□□ -0.44
Vps39Q8R5L3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Gm10076-201ENSMUST00000073238 384 ntBASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps39Q8R5L3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps39Q8R5L3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms