Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp7Q8R1T1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Gm8566-201ENSMUST00000120174 465 ntBASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Gm8199-201ENSMUST00000121323 823 ntBASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Gm28686-201ENSMUST00000187404 609 ntBASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Ighv1-48-201ENSMUST00000191795 294 ntBASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Gm8956-201ENSMUST00000203939 825 ntBASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Gm44999-201ENSMUST00000207456 1493 ntBASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 AC154671.1-201ENSMUST00000228617 1578 ntBASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC15.7■□□□□ 0.1
Chmp7Q8R1T1 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Gm11667-201ENSMUST00000119828 486 ntBASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Gm12029-201ENSMUST00000120073 832 ntBASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Gm10774-201ENSMUST00000188689 204 ntBASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Gm44711-201ENSMUST00000205414 1264 ntBASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp7Q8R1T1 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Gm13809-201ENSMUST00000117921 597 ntBASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Gm12164-201ENSMUST00000121695 551 ntBASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Gm17391-201ENSMUST00000171036 126 ntBASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Gm27438-201ENSMUST00000183480 110 ntBASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Mir7686-201ENSMUST00000200604 57 ntBASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Gm45909-201ENSMUST00000212413 1031 ntBASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp7Q8R1T1 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms