Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Gm14832-201ENSMUST00000121289 322 ntBASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Gm20426-201ENSMUST00000173657 440 ntBASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Zcchc9Q8R1J3 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Gm24749-201ENSMUST00000157838 343 ntBASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Gm16296-201ENSMUST00000159905 325 ntBASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Zcchc9Q8R1J3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Gm5070-201ENSMUST00000177599 862 ntBASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Gm18730-201ENSMUST00000218038 343 ntBASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.31□□□□□ -0.44
Zcchc9Q8R1J3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms