Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.52□□□□□ -0.25
PdgfcQ8CI19 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PdgfcQ8CI19 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Gm22144-201ENSMUST00000157402 102 ntBASIC13.51□□□□□ -0.25
PdgfcQ8CI19 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Gm18711-201ENSMUST00000199341 750 ntBASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Gm45398-201ENSMUST00000210561 165 ntBASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PdgfcQ8CI19 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Gm45219-201ENSMUST00000205602 465 ntBASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Gm9463-201ENSMUST00000206707 601 ntBASIC13.5□□□□□ -0.25
PdgfcQ8CI19 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdgfcQ8CI19 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PdgfcQ8CI19 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms