Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Gm8018-201ENSMUST00000173536 789 ntBASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Gm9022-201ENSMUST00000182482 992 ntBASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Gm24136-201ENSMUST00000083374 165 ntBASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vcpip1Q8CDG3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Gm43822-201ENSMUST00000200285 476 ntBASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Gm35960-201ENSMUST00000202712 767 ntBASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Gm3961-201ENSMUST00000204425 994 ntBASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vcpip1Q8CDG3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vcpip1Q8CDG3 Gm12502-201ENSMUST00000120197 444 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms