Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lrif1Q8CDD9 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Gm44069-201ENSMUST00000204898 506 ntBASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lrif1Q8CDD9 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Gm16202-201ENSMUST00000117532 544 ntBASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lrif1Q8CDD9 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lrif1Q8CDD9 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms