Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Gm17827-201ENSMUST00000211825 742 ntBASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ptcd1Q8C2E4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Gm9132-201ENSMUST00000210182 832 ntBASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Gm270-201ENSMUST00000223010 976 ntBASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.17■□□□□ 0.02
Ptcd1Q8C2E4 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Gm12196-201ENSMUST00000120954 262 ntBASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 H2-Q3-201ENSMUST00000172583 608 ntBASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Gm25951-201ENSMUST00000175330 64 ntBASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Gm22119-201ENSMUST00000175594 99 ntBASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Gm5733-201ENSMUST00000190232 939 ntBASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Gm42937-201ENSMUST00000197360 752 ntBASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Gm42682-201ENSMUST00000198349 1265 ntBASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Gm4482-201ENSMUST00000200876 742 ntBASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Gm6905-201ENSMUST00000205729 511 ntBASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 CT485607.1-201ENSMUST00000216100 85 ntBASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Gm18974-201ENSMUST00000221478 1031 ntBASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ptcd1Q8C2E4 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ptcd1Q8C2E4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptcd1Q8C2E4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ptcd1Q8C2E4 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Ptcd1Q8C2E4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptcd1Q8C2E4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ptcd1Q8C2E4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptcd1Q8C2E4 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ptcd1Q8C2E4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms