Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sh3rf3Q8C120 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sh3rf3Q8C120 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Sh3rf3Q8C120 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sh3rf3Q8C120 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Mir1247-201ENSMUST00000116706 82 ntBASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Gm12058-201ENSMUST00000118614 437 ntBASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Gm13786-201ENSMUST00000122371 333 ntBASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Gm37201-201ENSMUST00000191845 523 ntBASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Gm42693-201ENSMUST00000196779 631 ntBASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Olfr284-202ENSMUST00000206647 966 ntBASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sh3rf3Q8C120 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Gm25214-201ENSMUST00000104573 129 ntBASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Gm15370-201ENSMUST00000117158 253 ntBASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Gm25043-201ENSMUST00000158604 212 ntBASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf3Q8C120 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Gm11531-201ENSMUST00000117614 555 ntBASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.81□□□□□ -0.36
Sh3rf3Q8C120 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms