Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Gm15707-201ENSMUST00000118804 996 ntBASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Gm8197-202ENSMUST00000193422 934 ntBASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Gm34379-201ENSMUST00000195036 290 ntBASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Smg1Q8BKX6 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Gm24279-201ENSMUST00000104236 131 ntBASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Gm12337-201ENSMUST00000119634 400 ntBASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Gm26134-201ENSMUST00000178484 110 ntBASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.11□□□□□ -0.79
Smg1Q8BKX6 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Gm4930-201ENSMUST00000219926 1087 ntBASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Gm12791-201ENSMUST00000120788 655 ntBASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Gm43249-201ENSMUST00000200464 458 ntBASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Gm8181-201ENSMUST00000062242 669 ntBASIC10.11□□□□□ -0.79
Smg1Q8BKX6 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smg1Q8BKX6 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smg1Q8BKX6 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC10.1□□□□□ -0.79
Smg1Q8BKX6 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm23400-201ENSMUST00000174994 102 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm26463-201ENSMUST00000175065 101 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm24332-201ENSMUST00000175102 102 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm25959-201ENSMUST00000175112 102 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm22475-201ENSMUST00000175169 102 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm22903-201ENSMUST00000175193 102 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm25070-201ENSMUST00000175237 102 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm24159-201ENSMUST00000175264 102 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm25299-201ENSMUST00000175283 102 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm23798-201ENSMUST00000175560 102 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm23802-201ENSMUST00000175565 102 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm25708-201ENSMUST00000177687 102 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm24370-201ENSMUST00000178007 102 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm23049-201ENSMUST00000178068 102 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm28019-201ENSMUST00000178138 101 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm25571-201ENSMUST00000178322 102 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm25355-201ENSMUST00000178456 101 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm24975-201ENSMUST00000178492 101 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm23189-201ENSMUST00000178954 102 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm25100-201ENSMUST00000179750 101 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm23064-201ENSMUST00000179866 101 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm45546-201ENSMUST00000211053 2394 ntBASIC10.1□□□□□ -0.79
Smg1Q8BKX6 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms