Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Gm24644-201ENSMUST00000157114 139 ntBASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Srrm3Q80WV7 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Gm15703-201ENSMUST00000120250 880 ntBASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Gm15376-201ENSMUST00000122258 783 ntBASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Gm38002-201ENSMUST00000193255 180 ntBASIC12.85□□□□□ -0.35
Srrm3Q80WV7 AU022133-201ENSMUST00000200601 873 ntBASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Gm42550-201ENSMUST00000201553 960 ntBASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Gm10012-201ENSMUST00000078252 192 ntBASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Srrm3Q80WV7 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms