Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Gm12314-201ENSMUST00000118104 538 ntBASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Gm14208-201ENSMUST00000119645 678 ntBASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Mir6927-201ENSMUST00000184494 71 ntBASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh8Q7TSK3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Gm15703-201ENSMUST00000120250 880 ntBASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Gm6963-201ENSMUST00000147879 379 ntBASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Gm45224-201ENSMUST00000208203 414 ntBASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms