Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 AC165260.2-203ENSMUST00000224237 336 ntBASIC14.26□□□□□ -0.13
Nup98Q6PFD9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup98Q6PFD9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Gm11783-201ENSMUST00000119549 885 ntBASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Gm8737-201ENSMUST00000122208 642 ntBASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Gm38210-201ENSMUST00000191944 809 ntBASIC14.25□□□□□ -0.13
Nup98Q6PFD9 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Gm13937-201ENSMUST00000121000 988 ntBASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Gm14665-201ENSMUST00000122294 557 ntBASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Ighv5-11-201ENSMUST00000193354 371 ntBASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup98Q6PFD9 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.25□□□□□ -0.13
Nup98Q6PFD9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup98Q6PFD9 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms