Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 n-R5s185-201ENSMUST00000083953 119 ntBASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Acot6-202ENSMUST00000222921 3622 ntBASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slx4Q6P1D7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Gm17192-201ENSMUST00000169031 511 ntBASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Gm8574-201ENSMUST00000203207 924 ntBASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Gm18561-201ENSMUST00000206027 804 ntBASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Gm2553-201ENSMUST00000215986 605 ntBASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Gm14807-201ENSMUST00000116640 983 ntBASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Gm15003-201ENSMUST00000118884 446 ntBASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Gm19015-201ENSMUST00000184002 1189 ntBASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Gm43852-201ENSMUST00000202098 917 ntBASIC18.59■□□□□ 0.57
Slx4Q6P1D7 AC114645.1-201ENSMUST00000215831 187 ntBASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Gm23105-201ENSMUST00000083719 134 ntBASIC18.59■□□□□ 0.57
Slx4Q6P1D7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC18.58■□□□□ 0.57
Slx4Q6P1D7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Slx4Q6P1D7 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Slx4Q6P1D7 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slx4Q6P1D7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slx4Q6P1D7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
Slx4Q6P1D7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slx4Q6P1D7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Slx4Q6P1D7 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Slx4Q6P1D7 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Slx4Q6P1D7 Gm9884-201ENSMUST00000194343 1222 ntBASIC18.58■□□□□ 0.56
Slx4Q6P1D7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slx4Q6P1D7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Slx4Q6P1D7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Slx4Q6P1D7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Gm37437-201ENSMUST00000194451 1937 ntBASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Gm13019-201ENSMUST00000120000 276 ntBASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 AC238811.4-201ENSMUST00000178019 1246 ntBASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Gm9630-201ENSMUST00000178304 885 ntBASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 AC238940.3-201ENSMUST00000178830 1246 ntBASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slx4Q6P1D7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Slx4Q6P1D7 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms