Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.05□□□□□ -0.48
Sim2Q61079 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sim2Q61079 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Sim2Q61079 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sim2Q61079 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Sim2Q61079 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Sim2Q61079 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sim2Q61079 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.04□□□□□ -0.48
Sim2Q61079 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sim2Q61079 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sim2Q61079 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.04□□□□□ -0.48
Sim2Q61079 Gm22442-201ENSMUST00000157256 144 ntBASIC12.04□□□□□ -0.48
Sim2Q61079 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.04□□□□□ -0.48
Sim2Q61079 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.04□□□□□ -0.48
Sim2Q61079 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.04□□□□□ -0.48
Sim2Q61079 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sim2Q61079 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.04□□□□□ -0.48
Sim2Q61079 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.04□□□□□ -0.48
Sim2Q61079 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Sim2Q61079 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sim2Q61079 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.04□□□□□ -0.48
Sim2Q61079 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sim2Q61079 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Sim2Q61079 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Sim2Q61079 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.03□□□□□ -0.48
Sim2Q61079 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.03□□□□□ -0.48
Sim2Q61079 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.03□□□□□ -0.48
Sim2Q61079 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 Gm1848-201ENSMUST00000120711 789 ntBASIC12.03□□□□□ -0.48
Sim2Q61079 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.03□□□□□ -0.48
Sim2Q61079 Gm8343-201ENSMUST00000182705 994 ntBASIC12.03□□□□□ -0.48
Sim2Q61079 Gm44958-201ENSMUST00000203734 736 ntBASIC12.03□□□□□ -0.48
Sim2Q61079 Gm19091-201ENSMUST00000208120 978 ntBASIC12.03□□□□□ -0.48
Sim2Q61079 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.03□□□□□ -0.48
Sim2Q61079 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sim2Q61079 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.03□□□□□ -0.48
Sim2Q61079 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.03□□□□□ -0.48
Sim2Q61079 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.03□□□□□ -0.48
Sim2Q61079 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.03□□□□□ -0.48
Sim2Q61079 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim2Q61079 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sim2Q61079 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sim2Q61079 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sim2Q61079 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sim2Q61079 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sim2Q61079 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sim2Q61079 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sim2Q61079 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sim2Q61079 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms