Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Scn2bQ56A07 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.17□□□□□ -0.46
Scn2bQ56A07 Gm8062-201ENSMUST00000139696 444 ntBASIC12.17□□□□□ -0.46
Scn2bQ56A07 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Gm27243-201ENSMUST00000183964 521 ntBASIC12.17□□□□□ -0.46
Scn2bQ56A07 Gm37424-201ENSMUST00000191727 561 ntBASIC12.17□□□□□ -0.46
Scn2bQ56A07 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.17□□□□□ -0.46
Scn2bQ56A07 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.17□□□□□ -0.46
Scn2bQ56A07 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Scn2bQ56A07 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Gm25927-201ENSMUST00000175058 117 ntBASIC12.16□□□□□ -0.46
Scn2bQ56A07 Gm37008-201ENSMUST00000195712 319 ntBASIC12.16□□□□□ -0.46
Scn2bQ56A07 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.16□□□□□ -0.46
Scn2bQ56A07 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.16□□□□□ -0.46
Scn2bQ56A07 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn2bQ56A07 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.15□□□□□ -0.46
Scn2bQ56A07 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Paupar-201ENSMUST00000194826 3482 ntBASIC12.15□□□□□ -0.46
Scn2bQ56A07 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Rmrp-201ENSMUST00000157463 271 ntBASIC12.15□□□□□ -0.46
Scn2bQ56A07 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Gm16379-201ENSMUST00000161469 348 ntBASIC12.15□□□□□ -0.46
Scn2bQ56A07 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.15□□□□□ -0.46
Scn2bQ56A07 Gm8762-201ENSMUST00000193486 339 ntBASIC12.15□□□□□ -0.46
Scn2bQ56A07 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn2bQ56A07 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.15□□□□□ -0.46
Scn2bQ56A07 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.15□□□□□ -0.46
Scn2bQ56A07 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.15□□□□□ -0.46
Scn2bQ56A07 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Scn2bQ56A07 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Scn2bQ56A07 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn2bQ56A07 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn2bQ56A07 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms