Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim40Q3UWA4 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim40Q3UWA4 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim40Q3UWA4 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.54□□□□□ -0.56
Trim40Q3UWA4 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim40Q3UWA4 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim40Q3UWA4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim40Q3UWA4 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.54□□□□□ -0.56
Trim40Q3UWA4 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim40Q3UWA4 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trim40Q3UWA4 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim40Q3UWA4 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim40Q3UWA4 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Gm24231-201ENSMUST00000104315 133 ntBASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Gm5687-201ENSMUST00000118252 640 ntBASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Gm12384-201ENSMUST00000119228 919 ntBASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Gm15703-201ENSMUST00000120250 880 ntBASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Gm15429-201ENSMUST00000151268 798 ntBASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Mir6392-201ENSMUST00000184924 108 ntBASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Mir7654-201ENSMUST00000185082 70 ntBASIC11.53□□□□□ -0.56
Trim40Q3UWA4 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim40Q3UWA4 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trim40Q3UWA4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Trim40Q3UWA4 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim40Q3UWA4 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.52□□□□□ -0.56
Trim40Q3UWA4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim40Q3UWA4 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trim40Q3UWA4 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim40Q3UWA4 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim40Q3UWA4 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim40Q3UWA4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trim40Q3UWA4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Gm37917-201ENSMUST00000194711 392 ntBASIC11.52□□□□□ -0.57
Trim40Q3UWA4 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim40Q3UWA4 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.51□□□□□ -0.57
Trim40Q3UWA4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms