Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Gm11531-201ENSMUST00000117614 555 ntBASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Gm18935-201ENSMUST00000212692 664 ntBASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdkl5Q3UTQ8 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Gm23912-201ENSMUST00000104687 87 ntBASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Gm15370-201ENSMUST00000117158 253 ntBASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Gm14832-201ENSMUST00000121289 322 ntBASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Gm26956-201ENSMUST00000182176 986 ntBASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cdkl5Q3UTQ8 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdkl5Q3UTQ8 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdkl5Q3UTQ8 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms