Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd8Q09XV5 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Chd8Q09XV5 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd8Q09XV5 Gm9856-201ENSMUST00000217077 2578 ntBASIC10.97□□□□□ -0.65
Chd8Q09XV5 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd8Q09XV5 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Chd8Q09XV5 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Chd8Q09XV5 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10.97□□□□□ -0.65
Chd8Q09XV5 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.97□□□□□ -0.65
Chd8Q09XV5 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd8Q09XV5 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd8Q09XV5 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.97□□□□□ -0.65
Chd8Q09XV5 Gm9797-202ENSMUST00000218003 294 ntBASIC10.97□□□□□ -0.65
Chd8Q09XV5 AC117769.1-201ENSMUST00000224716 1120 ntBASIC10.97□□□□□ -0.65
Chd8Q09XV5 Gm26782-203ENSMUST00000227103 751 ntBASIC10.97□□□□□ -0.65
Chd8Q09XV5 Gm8615-201ENSMUST00000025307 771 ntBASIC10.97□□□□□ -0.65
Chd8Q09XV5 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.97□□□□□ -0.65
Chd8Q09XV5 Gm5451-201ENSMUST00000080545 579 ntBASIC10.97□□□□□ -0.65
Chd8Q09XV5 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Chd8Q09XV5 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd8Q09XV5 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd8Q09XV5 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.96□□□□□ -0.65
Chd8Q09XV5 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd8Q09XV5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Chd8Q09XV5 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Chd8Q09XV5 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Chd8Q09XV5 Gm7765-201ENSMUST00000182585 974 ntBASIC10.96□□□□□ -0.65
Chd8Q09XV5 Gm18124-201ENSMUST00000210695 706 ntBASIC10.96□□□□□ -0.65
Chd8Q09XV5 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC10.96□□□□□ -0.65
Chd8Q09XV5 AC154433.1-201ENSMUST00000224401 1183 ntBASIC10.96□□□□□ -0.65
Chd8Q09XV5 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC10.96□□□□□ -0.65
Chd8Q09XV5 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd8Q09XV5 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Chd8Q09XV5 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd8Q09XV5 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd8Q09XV5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd8Q09XV5 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd8Q09XV5 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd8Q09XV5 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd8Q09XV5 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Chd8Q09XV5 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC10.96□□□□□ -0.66
Chd8Q09XV5 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC10.96□□□□□ -0.66
Chd8Q09XV5 AC153152.3-201ENSMUST00000222188 1135 ntBASIC10.96□□□□□ -0.66
Chd8Q09XV5 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd8Q09XV5 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd8Q09XV5 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd8Q09XV5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd8Q09XV5 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd8Q09XV5 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Chd8Q09XV5 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd8Q09XV5 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd8Q09XV5 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd8Q09XV5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd8Q09XV5 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.95□□□□□ -0.66
Chd8Q09XV5 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Gm11511-201ENSMUST00000118146 540 ntBASIC10.95□□□□□ -0.66
Chd8Q09XV5 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.95□□□□□ -0.66
Chd8Q09XV5 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.95□□□□□ -0.66
Chd8Q09XV5 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.95□□□□□ -0.66
Chd8Q09XV5 CT025618.1-201ENSMUST00000227409 1279 ntBASIC10.95□□□□□ -0.66
Chd8Q09XV5 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC10.95□□□□□ -0.66
Chd8Q09XV5 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.95□□□□□ -0.66
Chd8Q09XV5 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.95□□□□□ -0.66
Chd8Q09XV5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Gm12579-201ENSMUST00000118040 783 ntBASIC10.95□□□□□ -0.66
Chd8Q09XV5 Gm11475-201ENSMUST00000118482 476 ntBASIC10.95□□□□□ -0.66
Chd8Q09XV5 Gm11736-201ENSMUST00000121468 505 ntBASIC10.95□□□□□ -0.66
Chd8Q09XV5 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.95□□□□□ -0.66
Chd8Q09XV5 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chd8Q09XV5 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms