Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.51□□□□□ -0.25
Lig3P97386 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Lig3P97386 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.5□□□□□ -0.25
Lig3P97386 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.5□□□□□ -0.25
Lig3P97386 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.5□□□□□ -0.25
Lig3P97386 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Gm20426-201ENSMUST00000173657 440 ntBASIC13.5□□□□□ -0.25
Lig3P97386 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.5□□□□□ -0.25
Lig3P97386 Gm7467-201ENSMUST00000185173 652 ntBASIC13.5□□□□□ -0.25
Lig3P97386 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.5□□□□□ -0.25
Lig3P97386 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.5□□□□□ -0.25
Lig3P97386 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.5□□□□□ -0.25
Lig3P97386 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.5□□□□□ -0.25
Lig3P97386 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Lig3P97386 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Lig3P97386 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Lig3P97386 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Lig3P97386 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Lig3P97386 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.5□□□□□ -0.25
Lig3P97386 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.5□□□□□ -0.25
Lig3P97386 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lig3P97386 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Lig3P97386 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.49□□□□□ -0.25
Lig3P97386 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Lig3P97386 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.49□□□□□ -0.25
Lig3P97386 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Lig3P97386 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lig3P97386 Gm44100-201ENSMUST00000204329 436 ntBASIC13.49□□□□□ -0.25
Lig3P97386 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.49□□□□□ -0.25
Lig3P97386 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.49□□□□□ -0.25
Lig3P97386 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Lig3P97386 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.49□□□□□ -0.25
Lig3P97386 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.49□□□□□ -0.25
Lig3P97386 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lig3P97386 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lig3P97386 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
Lig3P97386 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.49□□□□□ -0.25
Lig3P97386 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Lig3P97386 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.49□□□□□ -0.25
Lig3P97386 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lig3P97386 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.48□□□□□ -0.25
Lig3P97386 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Lig3P97386 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lig3P97386 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lig3P97386 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms