Protein–RNA interactions for Protein: P97350

Pkp1, Plakophilin-1, mousemouse

Known RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1P97350 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pkp1P97350 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pkp1P97350 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Pkp1P97350 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pkp1P97350 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pkp1P97350 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pkp1P97350 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.35□□□□□ -0.11
Pkp1P97350 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Pkp1P97350 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.35□□□□□ -0.11
Pkp1P97350 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.35□□□□□ -0.11
Pkp1P97350 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pkp1P97350 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Gm27516-201ENSMUST00000184237 98 ntBASIC14.35□□□□□ -0.11
Pkp1P97350 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.35□□□□□ -0.11
Pkp1P97350 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.35□□□□□ -0.11
Pkp1P97350 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.35□□□□□ -0.11
Pkp1P97350 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.35□□□□□ -0.11
Pkp1P97350 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.35□□□□□ -0.11
Pkp1P97350 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pkp1P97350 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Pkp1P97350 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp1P97350 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp1P97350 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.34□□□□□ -0.11
Pkp1P97350 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp1P97350 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp1P97350 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.34□□□□□ -0.11
Pkp1P97350 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp1P97350 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pkp1P97350 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp1P97350 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp1P97350 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp1P97350 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp1P97350 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp1P97350 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.34□□□□□ -0.11
Pkp1P97350 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.34□□□□□ -0.11
Pkp1P97350 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pkp1P97350 Gm37489-201ENSMUST00000191883 159 ntBASIC14.34□□□□□ -0.11
Pkp1P97350 Gm42693-201ENSMUST00000196779 631 ntBASIC14.34□□□□□ -0.11
Pkp1P97350 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp1P97350 Gm6334-201ENSMUST00000207083 228 ntBASIC14.34□□□□□ -0.11
Pkp1P97350 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.34□□□□□ -0.11
Pkp1P97350 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.34□□□□□ -0.11
Pkp1P97350 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp1P97350 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.34□□□□□ -0.11
Pkp1P97350 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.34□□□□□ -0.11
Pkp1P97350 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.34□□□□□ -0.11
Pkp1P97350 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pkp1P97350 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkp1P97350 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pkp1P97350 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.33□□□□□ -0.11
Pkp1P97350 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pkp1P97350 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pkp1P97350 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pkp1P97350 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp1P97350 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp1P97350 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Pkp1P97350 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp1P97350 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.33□□□□□ -0.12
Pkp1P97350 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Pkp1P97350 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.33□□□□□ -0.12
Pkp1P97350 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.33□□□□□ -0.12
Pkp1P97350 Gm6621-201ENSMUST00000193251 772 ntBASIC14.33□□□□□ -0.12
Pkp1P97350 Gm18935-201ENSMUST00000212692 664 ntBASIC14.33□□□□□ -0.12
Pkp1P97350 Gm8712-201ENSMUST00000221090 701 ntBASIC14.33□□□□□ -0.12
Pkp1P97350 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp1P97350 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp1P97350 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp1P97350 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp1P97350 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp1P97350 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp1P97350 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.33□□□□□ -0.12
Pkp1P97350 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp1P97350 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp1P97350 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp1P97350 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp1P97350 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp1P97350 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp1P97350 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pkp1P97350 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pkp1P97350 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms