Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Crnkl1P63154 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.2□□□□□ -0.46
Crnkl1P63154 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Crnkl1P63154 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Crnkl1P63154 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.19□□□□□ -0.46
Crnkl1P63154 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Crnkl1P63154 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Gm12138-201ENSMUST00000122180 951 ntBASIC12.19□□□□□ -0.46
Crnkl1P63154 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.19□□□□□ -0.46
Crnkl1P63154 Gm15429-201ENSMUST00000151268 798 ntBASIC12.19□□□□□ -0.46
Crnkl1P63154 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.19□□□□□ -0.46
Crnkl1P63154 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.19□□□□□ -0.46
Crnkl1P63154 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.19□□□□□ -0.46
Crnkl1P63154 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.19□□□□□ -0.46
Crnkl1P63154 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Crnkl1P63154 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.19□□□□□ -0.46
Crnkl1P63154 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Crnkl1P63154 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.19□□□□□ -0.46
Crnkl1P63154 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.18□□□□□ -0.46
Crnkl1P63154 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.18□□□□□ -0.46
Crnkl1P63154 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.18□□□□□ -0.46
Crnkl1P63154 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Crnkl1P63154 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Crnkl1P63154 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Crnkl1P63154 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.18□□□□□ -0.46
Crnkl1P63154 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.18□□□□□ -0.46
Crnkl1P63154 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.18□□□□□ -0.46
Crnkl1P63154 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Crnkl1P63154 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Crnkl1P63154 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Crnkl1P63154 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.18□□□□□ -0.46
Crnkl1P63154 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Crnkl1P63154 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Crnkl1P63154 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.17□□□□□ -0.46
Crnkl1P63154 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Crnkl1P63154 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Crnkl1P63154 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.17□□□□□ -0.46
Crnkl1P63154 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Crnkl1P63154 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 Gm38144-201ENSMUST00000192790 465 ntBASIC12.17□□□□□ -0.46
Crnkl1P63154 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Crnkl1P63154 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms