Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nub1P54729 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nub1P54729 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.3□□□□□ -0.28
Nub1P54729 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.3□□□□□ -0.28
Nub1P54729 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nub1P54729 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.3□□□□□ -0.28
Nub1P54729 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.3□□□□□ -0.28
Nub1P54729 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nub1P54729 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nub1P54729 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nub1P54729 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nub1P54729 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Nub1P54729 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nub1P54729 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.3□□□□□ -0.28
Nub1P54729 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nub1P54729 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Nub1P54729 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nub1P54729 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nub1P54729 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Nub1P54729 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nub1P54729 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nub1P54729 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nub1P54729 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nub1P54729 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nub1P54729 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nub1P54729 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 Gm13570-201ENSMUST00000140763 309 ntBASIC13.29□□□□□ -0.28
Nub1P54729 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.29□□□□□ -0.28
Nub1P54729 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 Gm23119-201ENSMUST00000158610 140 ntBASIC13.29□□□□□ -0.28
Nub1P54729 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nub1P54729 Gm42937-201ENSMUST00000197360 752 ntBASIC13.29□□□□□ -0.28
Nub1P54729 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.29□□□□□ -0.28
Nub1P54729 Gm45865-201ENSMUST00000211815 945 ntBASIC13.29□□□□□ -0.28
Nub1P54729 AC153961.1-201ENSMUST00000217760 385 ntBASIC13.29□□□□□ -0.28
Nub1P54729 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nub1P54729 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.29□□□□□ -0.28
Nub1P54729 Gm24136-201ENSMUST00000083374 165 ntBASIC13.29□□□□□ -0.28
Nub1P54729 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Nub1P54729 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nub1P54729 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.29□□□□□ -0.28
Nub1P54729 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nub1P54729 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nub1P54729 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nub1P54729 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Nub1P54729 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Nub1P54729 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Nub1P54729 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.28□□□□□ -0.28
Nub1P54729 Gm27023-201ENSMUST00000182372 285 ntBASIC13.28□□□□□ -0.28
Nub1P54729 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.28□□□□□ -0.28
Nub1P54729 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.28□□□□□ -0.28
Nub1P54729 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nub1P54729 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.28□□□□□ -0.28
Nub1P54729 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nub1P54729 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nub1P54729 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.28□□□□□ -0.28
Nub1P54729 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nub1P54729 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.28□□□□□ -0.28
Nub1P54729 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Nub1P54729 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nub1P54729 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nub1P54729 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nub1P54729 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nub1P54729 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Nub1P54729 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nub1P54729 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms