Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Brca1P48754 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Brca1P48754 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC13.57□□□□□ -0.24
Brca1P48754 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.57□□□□□ -0.24
Brca1P48754 Gm26134-201ENSMUST00000178484 110 ntBASIC13.57□□□□□ -0.24
Brca1P48754 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.57□□□□□ -0.24
Brca1P48754 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Brca1P48754 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.57□□□□□ -0.24
Brca1P48754 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Brca1P48754 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Brca1P48754 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Brca1P48754 Map1b-203ENSMUST00000223725 2669 ntBASIC13.56□□□□□ -0.24
Brca1P48754 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Brca1P48754 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Brca1P48754 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.56□□□□□ -0.24
Brca1P48754 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.56□□□□□ -0.24
Brca1P48754 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Brca1P48754 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Brca1P48754 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Brca1P48754 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Brca1P48754 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC13.56□□□□□ -0.24
Brca1P48754 Gm44315-201ENSMUST00000203041 219 ntBASIC13.56□□□□□ -0.24
Brca1P48754 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Brca1P48754 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.56□□□□□ -0.24
Brca1P48754 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brca1P48754 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Brca1P48754 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brca1P48754 Gm11783-201ENSMUST00000119549 885 ntBASIC13.55□□□□□ -0.24
Brca1P48754 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Brca1P48754 Gm11244-201ENSMUST00000121243 237 ntBASIC13.55□□□□□ -0.24
Brca1P48754 Gm10169-201ENSMUST00000121822 348 ntBASIC13.55□□□□□ -0.24
Brca1P48754 Gm7150-201ENSMUST00000122032 981 ntBASIC13.55□□□□□ -0.24
Brca1P48754 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Brca1P48754 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Brca1P48754 Gm20414-201ENSMUST00000172918 646 ntBASIC13.55□□□□□ -0.24
Brca1P48754 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brca1P48754 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Brca1P48754 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC13.55□□□□□ -0.24
Brca1P48754 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brca1P48754 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.55□□□□□ -0.24
Brca1P48754 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.55□□□□□ -0.24
Brca1P48754 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Brca1P48754 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Brca1P48754 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brca1P48754 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brca1P48754 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Brca1P48754 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brca1P48754 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brca1P48754 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brca1P48754 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brca1P48754 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brca1P48754 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brca1P48754 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC13.55□□□□□ -0.24
Brca1P48754 Gm15610-201ENSMUST00000120584 195 ntBASIC13.55□□□□□ -0.24
Brca1P48754 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.55□□□□□ -0.24
Brca1P48754 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brca1P48754 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.55□□□□□ -0.24
Brca1P48754 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.55□□□□□ -0.24
Brca1P48754 Gm3433-201ENSMUST00000210149 1058 ntBASIC13.55□□□□□ -0.24
Brca1P48754 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Brca1P48754 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.55□□□□□ -0.24
Brca1P48754 Gm18514-201ENSMUST00000218980 436 ntBASIC13.55□□□□□ -0.24
Brca1P48754 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms