Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Prox1P48437 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Prox1P48437 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Prox1P48437 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Prox1P48437 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Prox1P48437 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.82□□□□□ -0.52
Prox1P48437 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Prox1P48437 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Prox1P48437 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Prox1P48437 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.82□□□□□ -0.52
Prox1P48437 Gm14921-201ENSMUST00000118643 908 ntBASIC11.82□□□□□ -0.52
Prox1P48437 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Prox1P48437 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.82□□□□□ -0.52
Prox1P48437 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.82□□□□□ -0.52
Prox1P48437 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.82□□□□□ -0.52
Prox1P48437 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Prox1P48437 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Prox1P48437 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Prox1P48437 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Prox1P48437 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Prox1P48437 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.82□□□□□ -0.52
Prox1P48437 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.82□□□□□ -0.52
Prox1P48437 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Prox1P48437 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.82□□□□□ -0.52
Prox1P48437 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Prox1P48437 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Prox1P48437 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Prox1P48437 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.81□□□□□ -0.52
Prox1P48437 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 Gm25927-201ENSMUST00000175058 117 ntBASIC11.81□□□□□ -0.52
Prox1P48437 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Prox1P48437 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.81□□□□□ -0.52
Prox1P48437 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.81□□□□□ -0.52
Prox1P48437 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.81□□□□□ -0.52
Prox1P48437 Gm38671-201ENSMUST00000200573 130 ntBASIC11.81□□□□□ -0.52
Prox1P48437 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.81□□□□□ -0.52
Prox1P48437 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms