Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 AC022682.1-201ENSMUST00000224624 2023 ntBASIC12.69□□□□□ -0.38
HttP42859 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.69□□□□□ -0.38
HttP42859 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HttP42859 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.69□□□□□ -0.38
HttP42859 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
HttP42859 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC12.68□□□□□ -0.38
HttP42859 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
HttP42859 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC12.68□□□□□ -0.38
HttP42859 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC12.68□□□□□ -0.38
HttP42859 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.68□□□□□ -0.38
HttP42859 Gm17936-201ENSMUST00000199413 988 ntBASIC12.68□□□□□ -0.38
HttP42859 Gm43106-201ENSMUST00000199485 637 ntBASIC12.68□□□□□ -0.38
HttP42859 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
HttP42859 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.68□□□□□ -0.38
HttP42859 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.68□□□□□ -0.38
HttP42859 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.68□□□□□ -0.38
HttP42859 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.68□□□□□ -0.38
HttP42859 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
HttP42859 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
HttP42859 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC12.68□□□□□ -0.38
HttP42859 Gm22763-201ENSMUST00000158374 107 ntBASIC12.68□□□□□ -0.38
HttP42859 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.68□□□□□ -0.38
HttP42859 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC12.68□□□□□ -0.38
HttP42859 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC12.68□□□□□ -0.38
HttP42859 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
HttP42859 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC12.68□□□□□ -0.38
HttP42859 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 Gm10581-201ENSMUST00000097986 231 ntBASIC12.68□□□□□ -0.38
HttP42859 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.68□□□□□ -0.38
HttP42859 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.68□□□□□ -0.38
HttP42859 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
HttP42859 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HttP42859 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
HttP42859 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC12.68□□□□□ -0.38
HttP42859 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 Gm2553-201ENSMUST00000215986 605 ntBASIC12.68□□□□□ -0.38
HttP42859 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC12.68□□□□□ -0.38
HttP42859 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HttP42859 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.68□□□□□ -0.38
HttP42859 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
HttP42859 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HttP42859 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
HttP42859 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.67□□□□□ -0.38
HttP42859 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
HttP42859 Mir1941-201ENSMUST00000157834 83 ntBASIC12.67□□□□□ -0.38
HttP42859 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12.67□□□□□ -0.38
HttP42859 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC12.67□□□□□ -0.38
HttP42859 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC12.67□□□□□ -0.38
HttP42859 Gm42689-201ENSMUST00000202403 404 ntBASIC12.67□□□□□ -0.38
HttP42859 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
HttP42859 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HttP42859 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
HttP42859 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.67□□□□□ -0.38
HttP42859 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.67□□□□□ -0.38
HttP42859 Gm43167-201ENSMUST00000202001 1606 ntBASIC12.67□□□□□ -0.38
HttP42859 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HttP42859 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms