Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cd27P41272 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cd27P41272 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cd27P41272 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Cd27P41272 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Cd27P41272 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Cd27P41272 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Cd27P41272 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC9.88□□□□□ -0.83
Cd27P41272 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Cd27P41272 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Cd27P41272 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Gm15547-201ENSMUST00000122152 333 ntBASIC9.88□□□□□ -0.83
Cd27P41272 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Cd27P41272 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.88□□□□□ -0.83
Cd27P41272 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Ighv1-62-201ENSMUST00000193406 350 ntBASIC9.88□□□□□ -0.83
Cd27P41272 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.88□□□□□ -0.83
Cd27P41272 AC163667.3-201ENSMUST00000225774 222 ntBASIC9.88□□□□□ -0.83
Cd27P41272 AC154222.2-201ENSMUST00000225848 607 ntBASIC9.88□□□□□ -0.83
Cd27P41272 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Cd27P41272 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.88□□□□□ -0.83
Cd27P41272 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC9.88□□□□□ -0.83
Cd27P41272 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
Cd27P41272 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cd27P41272 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.87□□□□□ -0.83
Cd27P41272 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Cd27P41272 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Cd27P41272 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cd27P41272 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cd27P41272 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Cd27P41272 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
Cd27P41272 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Gm24830-201ENSMUST00000102024 166 ntBASIC9.87□□□□□ -0.83
Cd27P41272 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC9.87□□□□□ -0.83
Cd27P41272 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Gm11930-201ENSMUST00000117788 190 ntBASIC9.87□□□□□ -0.83
Cd27P41272 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Gm17376-201ENSMUST00000166016 84 ntBASIC9.87□□□□□ -0.83
Cd27P41272 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cd27P41272 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC9.87□□□□□ -0.83
Cd27P41272 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC9.87□□□□□ -0.83
Cd27P41272 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Gm44364-201ENSMUST00000198368 141 ntBASIC9.87□□□□□ -0.83
Cd27P41272 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.87□□□□□ -0.83
Cd27P41272 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.87□□□□□ -0.83
Cd27P41272 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.87□□□□□ -0.83
Cd27P41272 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cd27P41272 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms