Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Rpl28P41105 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Gm18262-201ENSMUST00000222560 1946 ntBASIC8.28□□□□□ -1.08
Rpl28P41105 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC8.28□□□□□ -1.08
Rpl28P41105 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 BC043934-202ENSMUST00000185694 2356 ntBASIC8.28□□□□□ -1.08
Rpl28P41105 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC8.28□□□□□ -1.08
Rpl28P41105 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 AC122811.1-201ENSMUST00000222257 2921 ntBASIC8.28□□□□□ -1.08
Rpl28P41105 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
Rpl28P41105 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC8.28□□□□□ -1.08
Rpl28P41105 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Rpl28P41105 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Rpl28P41105 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC8.28□□□□□ -1.08
Rpl28P41105 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Gm9115-201ENSMUST00000120192 1348 ntBASIC8.28□□□□□ -1.08
Rpl28P41105 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Rpl28P41105 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rpl28P41105 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Rpl28P41105 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
Rpl28P41105 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Rpl28P41105 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
Rpl28P41105 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Rpl28P41105 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
Rpl28P41105 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Rpl28P41105 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
Rpl28P41105 Gm43622-201ENSMUST00000200140 2019 ntBASIC8.27□□□□□ -1.09
Rpl28P41105 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Rpl28P41105 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Rpl28P41105 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Gm18630-201ENSMUST00000222109 1397 ntBASIC8.27□□□□□ -1.09
Rpl28P41105 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC8.27□□□□□ -1.09
Rpl28P41105 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.09
Rpl28P41105 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC8.27□□□□□ -1.09
Rpl28P41105 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Rpl28P41105 Gm5687-201ENSMUST00000118252 640 ntBASIC8.27□□□□□ -1.09
Rpl28P41105 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC8.27□□□□□ -1.09
Rpl28P41105 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC8.27□□□□□ -1.09
Rpl28P41105 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC8.27□□□□□ -1.09
Rpl28P41105 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Rpl28P41105 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Rpl28P41105 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Rpl28P41105 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Rpl28P41105 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 AC126257.2-201ENSMUST00000215507 2300 ntBASIC8.27□□□□□ -1.09
Rpl28P41105 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Gm36957-201ENSMUST00000192982 2824 ntBASIC8.27□□□□□ -1.09
Rpl28P41105 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC8.27□□□□□ -1.09
Rpl28P41105 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Gm38273-201ENSMUST00000194987 2382 ntBASIC8.27□□□□□ -1.09
Rpl28P41105 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC8.27□□□□□ -1.09
Rpl28P41105 Gm10548-201ENSMUST00000097631 2629 ntBASIC8.27□□□□□ -1.09
Rpl28P41105 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rpl28P41105 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms