Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Timp3P39876 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.14□□□□□ -0.79
Timp3P39876 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.14□□□□□ -0.79
Timp3P39876 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.14□□□□□ -0.79
Timp3P39876 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.14□□□□□ -0.79
Timp3P39876 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Timp3P39876 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.14□□□□□ -0.79
Timp3P39876 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Timp3P39876 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.13□□□□□ -0.79
Timp3P39876 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Timp3P39876 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.13□□□□□ -0.79
Timp3P39876 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
Timp3P39876 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.13□□□□□ -0.79
Timp3P39876 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Timp3P39876 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.13□□□□□ -0.79
Timp3P39876 Gm15276-201ENSMUST00000145953 498 ntBASIC10.13□□□□□ -0.79
Timp3P39876 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Timp3P39876 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.13□□□□□ -0.79
Timp3P39876 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.13□□□□□ -0.79
Timp3P39876 Gm44405-201ENSMUST00000198952 126 ntBASIC10.13□□□□□ -0.79
Timp3P39876 Gm5950-201ENSMUST00000213337 772 ntBASIC10.13□□□□□ -0.79
Timp3P39876 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.13□□□□□ -0.79
Timp3P39876 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.13□□□□□ -0.79
Timp3P39876 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Mir339-201ENSMUST00000083659 96 ntBASIC10.13□□□□□ -0.79
Timp3P39876 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.13□□□□□ -0.79
Timp3P39876 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.13□□□□□ -0.79
Timp3P39876 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Map1b-203ENSMUST00000223725 2669 ntBASIC10.13□□□□□ -0.79
Timp3P39876 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Timp3P39876 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.13□□□□□ -0.79
Timp3P39876 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.13□□□□□ -0.79
Timp3P39876 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Timp3P39876 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Timp3P39876 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Timp3P39876 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.13□□□□□ -0.79
Timp3P39876 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.12□□□□□ -0.79
Timp3P39876 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.12□□□□□ -0.79
Timp3P39876 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
Timp3P39876 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
Timp3P39876 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Timp3P39876 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.12□□□□□ -0.79
Timp3P39876 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.12□□□□□ -0.79
Timp3P39876 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Timp3P39876 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.12□□□□□ -0.79
Timp3P39876 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.12□□□□□ -0.79
Timp3P39876 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Timp3P39876 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Timp3P39876 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Timp3P39876 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.12□□□□□ -0.79
Timp3P39876 Gm11531-201ENSMUST00000117614 555 ntBASIC10.12□□□□□ -0.79
Timp3P39876 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.12□□□□□ -0.79
Timp3P39876 Gm15547-201ENSMUST00000122152 333 ntBASIC10.12□□□□□ -0.79
Timp3P39876 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms