Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.6□□□□□ -0.39
Mmp13P33435 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Mmp13P33435 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Mmp13P33435 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.6□□□□□ -0.39
Mmp13P33435 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Mmp13P33435 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.6□□□□□ -0.39
Mmp13P33435 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.6□□□□□ -0.39
Mmp13P33435 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.6□□□□□ -0.39
Mmp13P33435 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Mmp13P33435 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.6□□□□□ -0.39
Mmp13P33435 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Mmp13P33435 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Mmp13P33435 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.6□□□□□ -0.39
Mmp13P33435 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Mmp13P33435 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Mmp13P33435 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.6□□□□□ -0.39
Mmp13P33435 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.6□□□□□ -0.39
Mmp13P33435 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Mmp13P33435 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.6□□□□□ -0.39
Mmp13P33435 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mmp13P33435 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.59□□□□□ -0.39
Mmp13P33435 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.59□□□□□ -0.39
Mmp13P33435 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Mmp13P33435 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.59□□□□□ -0.39
Mmp13P33435 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.59□□□□□ -0.39
Mmp13P33435 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.59□□□□□ -0.39
Mmp13P33435 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Mmp13P33435 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.59□□□□□ -0.39
Mmp13P33435 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Mmp13P33435 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.59□□□□□ -0.39
Mmp13P33435 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Gm38002-201ENSMUST00000193255 180 ntBASIC12.59□□□□□ -0.39
Mmp13P33435 Gm35960-201ENSMUST00000202712 767 ntBASIC12.59□□□□□ -0.39
Mmp13P33435 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.59□□□□□ -0.39
Mmp13P33435 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.59□□□□□ -0.39
Mmp13P33435 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.59□□□□□ -0.39
Mmp13P33435 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.59□□□□□ -0.39
Mmp13P33435 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Mmp13P33435 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Mmp13P33435 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Mmp13P33435 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mmp13P33435 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Mmp13P33435 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Mmp13P33435 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Mmp13P33435 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Mmp13P33435 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms