Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.61□□□□□ -0.71
Slc6a1P31648 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.61□□□□□ -0.71
Slc6a1P31648 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.61□□□□□ -0.71
Slc6a1P31648 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.61□□□□□ -0.71
Slc6a1P31648 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Gm19078-201ENSMUST00000206311 727 ntBASIC10.61□□□□□ -0.71
Slc6a1P31648 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Gm5161-201ENSMUST00000075243 853 ntBASIC10.61□□□□□ -0.71
Slc6a1P31648 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Slc6a1P31648 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.61□□□□□ -0.71
Slc6a1P31648 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.61□□□□□ -0.71
Slc6a1P31648 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Slc6a1P31648 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Slc6a1P31648 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Slc6a1P31648 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.6□□□□□ -0.71
Slc6a1P31648 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Slc6a1P31648 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.6□□□□□ -0.71
Slc6a1P31648 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.6□□□□□ -0.71
Slc6a1P31648 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.6□□□□□ -0.71
Slc6a1P31648 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.6□□□□□ -0.71
Slc6a1P31648 Gm15824-201ENSMUST00000119516 955 ntBASIC10.6□□□□□ -0.71
Slc6a1P31648 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.6□□□□□ -0.71
Slc6a1P31648 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.6□□□□□ -0.71
Slc6a1P31648 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Slc6a1P31648 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.6□□□□□ -0.71
Slc6a1P31648 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.6□□□□□ -0.71
Slc6a1P31648 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Slc6a1P31648 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Slc6a1P31648 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Slc6a1P31648 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Slc6a1P31648 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.6□□□□□ -0.71
Slc6a1P31648 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Slc6a1P31648 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Slc6a1P31648 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Slc6a1P31648 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Slc6a1P31648 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Slc6a1P31648 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Slc6a1P31648 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Slc6a1P31648 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Slc6a1P31648 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.59□□□□□ -0.71
Slc6a1P31648 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Slc6a1P31648 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.59□□□□□ -0.71
Slc6a1P31648 Gm6447-201ENSMUST00000118905 835 ntBASIC10.59□□□□□ -0.71
Slc6a1P31648 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Slc6a1P31648 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.59□□□□□ -0.71
Slc6a1P31648 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.59□□□□□ -0.71
Slc6a1P31648 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.71
Slc6a1P31648 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms