Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Ccl6P27784 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Ccl6P27784 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.59□□□□□ -0.87
Ccl6P27784 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Ccl6P27784 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Gm42480-201ENSMUST00000198434 2595 ntBASIC9.59□□□□□ -0.87
Ccl6P27784 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Ccl6P27784 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC9.59□□□□□ -0.87
Ccl6P27784 Gm5187-201ENSMUST00000117317 991 ntBASIC9.59□□□□□ -0.87
Ccl6P27784 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Gm15703-201ENSMUST00000120250 880 ntBASIC9.59□□□□□ -0.87
Ccl6P27784 Gm14760-201ENSMUST00000121831 999 ntBASIC9.59□□□□□ -0.87
Ccl6P27784 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC9.59□□□□□ -0.87
Ccl6P27784 Gm8062-201ENSMUST00000139696 444 ntBASIC9.59□□□□□ -0.87
Ccl6P27784 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Gm27514-201ENSMUST00000183692 110 ntBASIC9.59□□□□□ -0.87
Ccl6P27784 Gm27572-201ENSMUST00000183702 255 ntBASIC9.59□□□□□ -0.87
Ccl6P27784 Mir7085-201ENSMUST00000184353 66 ntBASIC9.59□□□□□ -0.87
Ccl6P27784 Gm5850-201ENSMUST00000192923 1206 ntBASIC9.59□□□□□ -0.87
Ccl6P27784 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.59□□□□□ -0.87
Ccl6P27784 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.59□□□□□ -0.87
Ccl6P27784 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.59□□□□□ -0.87
Ccl6P27784 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Ccl6P27784 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC9.59□□□□□ -0.87
Ccl6P27784 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Ccl6P27784 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Ccl6P27784 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Ccl6P27784 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.59□□□□□ -0.87
Ccl6P27784 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC9.59□□□□□ -0.87
Ccl6P27784 CT025624.1-201ENSMUST00000224007 2700 ntBASIC9.59□□□□□ -0.87
Ccl6P27784 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Ccl6P27784 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC9.59□□□□□ -0.87
Ccl6P27784 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Ccl6P27784 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Ccl6P27784 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.59□□□□□ -0.88
Ccl6P27784 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Ccl6P27784 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Ccl6P27784 Gm43321-201ENSMUST00000198897 2409 ntBASIC9.58□□□□□ -0.88
Ccl6P27784 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC9.58□□□□□ -0.88
Ccl6P27784 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Ccl6P27784 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.58□□□□□ -0.88
Ccl6P27784 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Ccl6P27784 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC9.58□□□□□ -0.88
Ccl6P27784 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl6P27784 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC9.58□□□□□ -0.88
Ccl6P27784 Gm6023-201ENSMUST00000118217 606 ntBASIC9.58□□□□□ -0.88
Ccl6P27784 Gm4986-201ENSMUST00000119731 549 ntBASIC9.58□□□□□ -0.88
Ccl6P27784 Gm13315-201ENSMUST00000120376 991 ntBASIC9.58□□□□□ -0.88
Ccl6P27784 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC9.58□□□□□ -0.88
Ccl6P27784 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC9.58□□□□□ -0.88
Ccl6P27784 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.58□□□□□ -0.88
Ccl6P27784 Gm19184-201ENSMUST00000196798 928 ntBASIC9.58□□□□□ -0.88
Ccl6P27784 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms