Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Aldh1a1P24549 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gm26286-201ENSMUST00000104166 134 ntBASIC13.29□□□□□ -0.28
Aldh1a1P24549 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gm11451-201ENSMUST00000118946 630 ntBASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gm11340-201ENSMUST00000119226 412 ntBASIC13.29□□□□□ -0.28
Aldh1a1P24549 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gm4726-201ENSMUST00000135604 736 ntBASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gm6019-201ENSMUST00000148369 736 ntBASIC13.29□□□□□ -0.28
Aldh1a1P24549 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Aldh1a1P24549 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gm8492-201ENSMUST00000182375 987 ntBASIC13.29□□□□□ -0.28
Aldh1a1P24549 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gm29107-201ENSMUST00000190910 347 ntBASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gm42518-201ENSMUST00000196277 938 ntBASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gm18893-201ENSMUST00000198416 943 ntBASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.29□□□□□ -0.28
Aldh1a1P24549 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.29□□□□□ -0.28
Aldh1a1P24549 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Aldh1a1P24549 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.28□□□□□ -0.28
Aldh1a1P24549 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Gm22144-201ENSMUST00000157402 102 ntBASIC13.28□□□□□ -0.28
Aldh1a1P24549 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.28□□□□□ -0.28
Aldh1a1P24549 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Gm37905-201ENSMUST00000195310 341 ntBASIC13.28□□□□□ -0.28
Aldh1a1P24549 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.28□□□□□ -0.28
Aldh1a1P24549 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Gm45166-201ENSMUST00000209073 683 ntBASIC13.28□□□□□ -0.28
Aldh1a1P24549 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.28□□□□□ -0.28
Aldh1a1P24549 AC125539.1-201ENSMUST00000227423 622 ntBASIC13.28□□□□□ -0.28
Aldh1a1P24549 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Snora73b-201ENSMUST00000083419 205 ntBASIC13.28□□□□□ -0.28
Aldh1a1P24549 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.28□□□□□ -0.28
Aldh1a1P24549 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Aldh1a1P24549 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Aldh1a1P24549 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Aldh1a1P24549 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Aldh1a1P24549 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Aldh1a1P24549 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Aldh1a1P24549 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Aldh1a1P24549 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Aldh1a1P24549 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Aldh1a1P24549 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms