Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ly6c1P0CW02 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.44□□□□□ -0.74
Ly6c1P0CW02 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ly6c1P0CW02 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ly6c1P0CW02 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Ly6c1P0CW02 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ly6c1P0CW02 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ly6c1P0CW02 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.44□□□□□ -0.74
Ly6c1P0CW02 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ly6c1P0CW02 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ly6c1P0CW02 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ly6c1P0CW02 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ly6c1P0CW02 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ly6c1P0CW02 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ly6c1P0CW02 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ly6c1P0CW02 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ly6c1P0CW02 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Gm22323-201ENSMUST00000103832 109 ntBASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Gm17376-201ENSMUST00000166016 84 ntBASIC10.43□□□□□ -0.74
Ly6c1P0CW02 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Gm18304-201ENSMUST00000189162 546 ntBASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Gm31256-201ENSMUST00000194705 506 ntBASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Gm42937-201ENSMUST00000197360 752 ntBASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Gm19253-201ENSMUST00000204279 307 ntBASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Higd1a-202ENSMUST00000213124 713 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 CT572999.1-201ENSMUST00000220315 1260 ntBASIC10.43□□□□□ -0.74
Ly6c1P0CW02 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ly6c1P0CW02 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ly6c1P0CW02 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Ly6c1P0CW02 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.42□□□□□ -0.74
Ly6c1P0CW02 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ly6c1P0CW02 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Ly6c1P0CW02 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ly6c1P0CW02 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ly6c1P0CW02 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ly6c1P0CW02 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.42□□□□□ -0.74
Ly6c1P0CW02 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ly6c1P0CW02 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ly6c1P0CW02 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ly6c1P0CW02 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ly6c1P0CW02 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ly6c1P0CW02 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ly6c1P0CW02 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ly6c1P0CW02 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Ly6c1P0CW02 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Ly6c1P0CW02 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms